Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs11569492 | chr19:6693273 | G/A | 0.000301 | 210 | 16.47 | 13.73 | 6.53 | KM Plot |
KIRP | rs11569494 | chr19:6692512 | T/C | 0.000276 | 213 | 16.47 | 13.67 | 6.53 | KM Plot |
KIRP | rs11569495 | chr19:6692443 | A/G | 0.000276 | 213 | 16.47 | 13.67 | 6.53 | KM Plot |
KIRP | rs11569496 | chr19:6692321 | C/T | 0.000276 | 213 | 16.47 | 13.67 | 6.53 | KM Plot |
KIRP | rs11569499 | chr19:6691952 | C/T | 0.000276 | 213 | 16.47 | 13.67 | 6.53 | KM Plot |
KIRP | rs11569500 | chr19:6691794 | A/G | 0.000276 | 213 | 16.47 | 13.67 | 6.53 | KM Plot |
KIRP | rs11584054 | chr1:89539336 | A/G | 3.44E-5 | 212 | 16.53 | 17.03 | 10.53 | KM Plot |
KIRP | rs11586025 | chr1:95275560 | T/A | 1.06E-6 | 207 | 11.32 | 14.87 | 16.5 | KM Plot |
KIRP | rs11589759 | chr1:95268009 | C/T | 3.72E-5 | 208 | 12.3 | 14.85 | 16.5 | KM Plot |
KIRP | rs11620832 | chr14:96053638 | C/A | 9.1E-7 | 213 | 14.83 | 23.63 | 9.77 | KM Plot |
KIRP | rs11621856 | chr14:96054087 | A/G | 3.77E-14 | 211 | 14.85 | 22.57 | 9.38 | KM Plot |
KIRP | rs11621895 | chr14:96054197 | A/C | 9.82E-7 | 213 | 14.53 | 29.5 | 9.77 | KM Plot |
KIRP | rs11624422 | chr14:96052895 | T/C | 9.1E-7 | 214 | 14.68 | 23.63 | 9.77 | KM Plot |
KIRP | rs11625329 | chr14:23718040 | C/T | 0.000359 | 204 | 14.53 | 17.62 | 17.13 | KM Plot |
KIRP | rs11626792 | chr14:96054578 | T/C | 9.82E-7 | 213 | 14.53 | 29.5 | 9.77 | KM Plot |